IL_6HCM_191

3D structure

PDB id

6HCM (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the rabbit collided di-ribosome (stalled monosome)

Experimental method

ELECTRON MICROSCOPY

Resolution

6.8 Å

Loop

Sequence

GAGGUUC*GUUC

Length

11 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6HCM|1|A1|G|1041
6HCM|1|A1|A|1042
6HCM|1|A1|G|1043
6HCM|1|A1|G|1044
6HCM|1|A1|U|1045
6HCM|1|A1|U|1046
6HCM|1|A1|C|1047
*
6HCM|1|A1|G|1071
6HCM|1|A1|U|1072
6HCM|1|A1|U|1073
6HCM|1|A1|C|1074

Current chains

Chain A1

18S ribosomal RNA

Nearby chains

Chain 52

Large subunit ribosomal RNA; LSU rRNA

Chain A3

Ribosomal protein L8

Chain O1

uS15

Chain P1

uS11

Chain b1

eS26

Chain p3

eL43