IL_6HCM_226

3D structure

PDB id

6HCM (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the rabbit collided di-ribosome (stalled monosome)

Experimental method

ELECTRON MICROSCOPY

Resolution

6.8 Å

Loop

Sequence

CCCUCAGUAAC*GUGAACAGGG

Length

21 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6HCM|1|52|C|79
6HCM|1|52|C|80
6HCM|1|52|C|81
6HCM|1|52|U|82
6HCM|1|52|C|83
6HCM|1|52|A|84
6HCM|1|52|G|85
6HCM|1|52|U|86
6HCM|1|52|A|87
6HCM|1|52|A|88
6HCM|1|52|C|89
*
6HCM|1|52|G|95
6HCM|1|52|U|96
6HCM|1|52|G|97
6HCM|1|52|A|98
6HCM|1|52|A|99
6HCM|1|52|C|100
6HCM|1|52|A|101
6HCM|1|52|G|102
6HCM|1|52|G|103
6HCM|1|52|G|104

Current chains

Chain 52

28S ribosomal RNA

Nearby chains

Chain L3

eL13

Chain N3

Ribosomal protein L15

Chain Q3

eL18

Chain a3

uL15

Chain o3

eL42