IL_6HCM_235
3D structure
- PDB id
- 6HCM (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the rabbit collided di-ribosome (stalled monosome)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 6.8 Å
Loop
- Sequence
- CUGGGAAGGCC*GCAGCAGCAGCUCG
- Length
- 25 nucleotides
- Bulged bases
- 6HCM|1|52|G|729, 6HCM|1|52|G|730, 6HCM|1|52|A|732, 6HCM|1|52|G|933, 6HCM|1|52|A|935, 6HCM|1|52|C|936
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6HCM|1|52|C|727
6HCM|1|52|U|728
6HCM|1|52|G|729
6HCM|1|52|G|730
6HCM|1|52|G|731
6HCM|1|52|A|732
6HCM|1|52|A|733
6HCM|1|52|G|734
6HCM|1|52|G|735
6HCM|1|52|C|736
6HCM|1|52|C|737
*
6HCM|1|52|G|927
6HCM|1|52|C|928
6HCM|1|52|A|929
6HCM|1|52|G|930
6HCM|1|52|C|931
6HCM|1|52|A|932
6HCM|1|52|G|933
6HCM|1|52|C|934
6HCM|1|52|A|935
6HCM|1|52|G|935|||A
6HCM|1|52|C|936
6HCM|1|52|U|937
6HCM|1|52|C|938
6HCM|1|52|G|939
Current chains
- Chain 52
- 28S ribosomal RNA
Nearby chains
- Chain C3
- uL4
- Chain F3
- uL30
- Chain M3
- Ribosomal protein L14
- Chain S3
- eL20
Coloring options: