IL_6HCM_244

3D structure

PDB id

6HCM (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the rabbit collided di-ribosome (stalled monosome)

Experimental method

ELECTRON MICROSCOPY

Resolution

6.8 Å

Loop

Sequence

AGCGAAUG*CAAACU

Length

14 nucleotides

Bulged bases

6HCM|1|52|G|1741

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6HCM|1|52|A|1738
6HCM|1|52|G|1739
6HCM|1|52|C|1740
6HCM|1|52|G|1741
6HCM|1|52|A|1742
6HCM|1|52|A|1743
6HCM|1|52|U|1744
6HCM|1|52|G|1745
*
6HCM|1|52|C|1785
6HCM|1|52|A|1786
6HCM|1|52|A|1787
6HCM|1|52|A|1788
6HCM|1|52|C|1789
6HCM|1|52|U|1790

Current chains

Chain 52

28S ribosomal RNA

Nearby chains

Chain 72

5S ribosomal RNA; 5S rRNA

Chain D3

60S ribosomal protein L5

Chain I3

60S ribosomal protein L10

Chain T3

eL21