IL_6HCM_260

3D structure

PDB id

6HCM (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the rabbit collided di-ribosome (stalled monosome)

Experimental method

ELECTRON MICROSCOPY

Resolution

6.8 Å

Loop

Sequence

GACAUGA*UGAUCGU

Length

14 nucleotides

Bulged bases

6HCM|1|52|A|3947, 6HCM|1|52|C|3948

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6HCM|1|52|G|3946
6HCM|1|52|A|3947
6HCM|1|52|C|3948
6HCM|1|52|A|3949
6HCM|1|52|U|3950
6HCM|1|52|G|3951
6HCM|1|52|A|3952
*
6HCM|1|52|U|4060
6HCM|1|52|G|4061
6HCM|1|52|A|4062
6HCM|1|52|U|4063
6HCM|1|52|C|4064
6HCM|1|52|G|4065
6HCM|1|52|U|4066

Current chains

Chain 52

28S ribosomal RNA

Nearby chains

Chain G3

eL8

Chain N3

Ribosomal protein L15

Chain i3

60S ribosomal protein L36

Chain u3

Ribosomal protein