IL_6HCM_330
3D structure
- PDB id
- 6HCM (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the rabbit collided di-ribosome (stalled monosome)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 6.8 Å
Loop
- Sequence
- GCGG*UAC
- Length
- 7 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6HCM_330 not in the Motif Atlas
- Homologous match to IL_8P9A_319
- Geometric discrepancy: 0.2129
- The information below is about IL_8P9A_319
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_55516.2
- Basepair signature
- cWW-cWW-cSH-cWW
- Number of instances in this motif group
- 7
Unit IDs
6HCM|1|52|G|3895
6HCM|1|52|C|3896
6HCM|1|52|G|3897
6HCM|1|52|G|3898
*
6HCM|1|52|U|4563
6HCM|1|52|A|4564
6HCM|1|52|C|4565
Current chains
- Chain 52
- 28S ribosomal RNA
Nearby chains
- Chain B3
- uL3
- Chain O3
- uL13
Coloring options: