IL_6HCM_338

3D structure

PDB id

6HCM (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the rabbit collided di-ribosome (stalled monosome)

Experimental method

ELECTRON MICROSCOPY

Resolution

6.8 Å

Loop

Sequence

UGCCAU*AGGCGGAA

Length

14 nucleotides

Bulged bases

6HCM|1|52|C|4720

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6HCM|1|52|U|4580
6HCM|1|52|G|4581
6HCM|1|52|C|4582
6HCM|1|52|C|4583
6HCM|1|52|A|4584
6HCM|1|52|U|4585
*
6HCM|1|52|A|4717
6HCM|1|52|G|4718
6HCM|1|52|G|4719
6HCM|1|52|C|4720
6HCM|1|52|G|4721
6HCM|1|52|G|4722
6HCM|1|52|A|4723
6HCM|1|52|A|4724

Current chains

Chain 52

28S ribosomal RNA

Nearby chains

Chain B3

uL3

Chain O3

uL13