IL_6HCM_347

3D structure

PDB id

6HCM (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the rabbit collided di-ribosome (stalled monosome)

Experimental method

ELECTRON MICROSCOPY

Resolution

6.8 Å

Loop

Sequence

GUUUCGUACG*UUGAAAGUCAGC

Length

22 nucleotides

Bulged bases

6HCM|1|52|G|5041, 6HCM|1|52|G|5049

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6HCM|1|52|G|5000
6HCM|1|52|U|5001
6HCM|1|52|U|5002
6HCM|1|52|U|5003
6HCM|1|52|C|5004
6HCM|1|52|G|5005
6HCM|1|52|U|5006
6HCM|1|52|A|5007
6HCM|1|52|C|5008
6HCM|1|52|G|5009
*
6HCM|1|52|U|5039
6HCM|1|52|U|5040
6HCM|1|52|G|5041
6HCM|1|52|A|5042
6HCM|1|52|A|5043
6HCM|1|52|A|5044
6HCM|1|52|G|5045
6HCM|1|52|U|5046
6HCM|1|52|C|5047
6HCM|1|52|A|5048
6HCM|1|52|G|5049
6HCM|1|52|C|5050

Current chains

Chain 52

28S ribosomal RNA

Nearby chains

Chain B3

uL3

Chain W3

eL24

Chain d3

eL31