IL_6HCQ_032

3D structure

PDB id

6HCQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the rabbit collided di-ribosome (collided monosome)

Experimental method

ELECTRON MICROSCOPY

Resolution

6.5 Å

Loop

Sequence

GGGAAGGUGGC*GUGUUACAGCCC

Length

23 nucleotides

Bulged bases

6HCQ|1|51|G|748, 6HCQ|1|51|C|916

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6HCQ|1|51|G|743
6HCQ|1|51|G|744
6HCQ|1|51|G|745
6HCQ|1|51|A|746
6HCQ|1|51|A|747
6HCQ|1|51|G|748
6HCQ|1|51|G|749
6HCQ|1|51|U|750
6HCQ|1|51|G|751
6HCQ|1|51|G|752
6HCQ|1|51|C|753
*
6HCQ|1|51|G|910
6HCQ|1|51|U|911
6HCQ|1|51|G|912
6HCQ|1|51|U|913
6HCQ|1|51|U|914
6HCQ|1|51|A|915
6HCQ|1|51|C|916
6HCQ|1|51|A|917
6HCQ|1|51|G|918
6HCQ|1|51|C|919
6HCQ|1|51|C|920
6HCQ|1|51|C|921

Current chains

Chain 51

28S ribosomal RNA

Nearby chains

Chain M3

Ribosomal protein L14

Chain S3

eL20