IL_6HCQ_057

3D structure

PDB id

6HCQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the rabbit collided di-ribosome (collided monosome)

Experimental method

ELECTRON MICROSCOPY

Resolution

6.5 Å

Loop

Sequence

GGUCUUGGG*CUCAACC

Length

16 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6HCQ|1|51|G|1752
6HCQ|1|51|G|1753
6HCQ|1|51|U|1754
6HCQ|1|51|C|1755
6HCQ|1|51|U|1756
6HCQ|1|51|U|1757
6HCQ|1|51|G|1758
6HCQ|1|51|G|1759
6HCQ|1|51|G|1760
*
6HCQ|1|51|C|1772
6HCQ|1|51|U|1773
6HCQ|1|51|C|1774
6HCQ|1|51|A|1775
6HCQ|1|51|A|1776
6HCQ|1|51|C|1777
6HCQ|1|51|C|1778

Current chains

Chain 51

28S ribosomal RNA

Nearby chains

Chain D3

60S ribosomal protein L5

Chain I3

60S ribosomal protein L10

Chain q3

Transfer RNA; tRNA