IL_6HCQ_091

3D structure

PDB id

6HCQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the rabbit collided di-ribosome (collided monosome)

Experimental method

ELECTRON MICROSCOPY

Resolution

6.5 Å

Loop

Sequence

GAA*UACC

Length

7 nucleotides

Bulged bases

6HCQ|1|51|A|3901, 6HCQ|1|51|C|4560

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6HCQ_091 not in the Motif Atlas

Homologous match to IL_8C3A_097

Geometric discrepancy: 0.2433

The information below is about IL_8C3A_097

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_54678.7

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

5

Unit IDs

6HCQ|1|51|G|3900
6HCQ|1|51|A|3901
6HCQ|1|51|A|3902
*
6HCQ|1|51|U|4558
6HCQ|1|51|A|4559
6HCQ|1|51|C|4560
6HCQ|1|51|C|4561

Current chains

Chain 51

28S ribosomal RNA

Nearby chains

Chain B3

uL3

Chain P3

uL22