IL_6HCQ_120

3D structure

PDB id

6HCQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the rabbit collided di-ribosome (collided monosome)

Experimental method

ELECTRON MICROSCOPY

Resolution

6.5 Å

Loop

Sequence

GGAUUAU*AGAAUCC

Length

14 nucleotides

Bulged bases

6HCQ|1|51|A|4708

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6HCQ|1|51|G|4679
6HCQ|1|51|G|4680
6HCQ|1|51|A|4681
6HCQ|1|51|U|4682
6HCQ|1|51|U|4683
6HCQ|1|51|A|4684
6HCQ|1|51|U|4685
*
6HCQ|1|51|A|4705
6HCQ|1|51|G|4706
6HCQ|1|51|A|4707
6HCQ|1|51|A|4708
6HCQ|1|51|U|4709
6HCQ|1|51|C|4710
6HCQ|1|51|C|4711

Current chains

Chain 51

28S ribosomal RNA

Nearby chains

Chain B3

uL3

Chain H3

uL6

Chain O3

uL13

Chain m3

eL40