IL_6HCQ_129

3D structure

PDB id

6HCQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the rabbit collided di-ribosome (collided monosome)

Experimental method

ELECTRON MICROSCOPY

Resolution

6.5 Å

Loop

Sequence

GCAGAG*CGAUC

Length

11 nucleotides

Bulged bases

6HCQ|1|51|C|5013

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6HCQ|1|51|G|5012
6HCQ|1|51|C|5013
6HCQ|1|51|A|5014
6HCQ|1|51|G|5015
6HCQ|1|51|A|5016
6HCQ|1|51|G|5017
*
6HCQ|1|51|C|5032
6HCQ|1|51|G|5033
6HCQ|1|51|A|5034
6HCQ|1|51|U|5035
6HCQ|1|51|C|5036

Current chains

Chain 51

28S ribosomal RNA

Nearby chains

Chain J2

eS8

Chain R3

eL19

Chain U3

eL22