IL_6HCQ_149

3D structure

PDB id

6HCQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the rabbit collided di-ribosome (collided monosome)

Experimental method

ELECTRON MICROSCOPY

Resolution

6.5 Å

Loop

Sequence

CUAUCAA*UGACCACGG

Length

16 nucleotides

Bulged bases

6HCQ|1|A2|U|361, 6HCQ|1|A2|C|399

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6HCQ|1|A2|C|358
6HCQ|1|A2|U|359
6HCQ|1|A2|A|360
6HCQ|1|A2|U|361
6HCQ|1|A2|C|362
6HCQ|1|A2|A|363
6HCQ|1|A2|A|364
*
6HCQ|1|A2|U|396
6HCQ|1|A2|G|397
6HCQ|1|A2|A|398
6HCQ|1|A2|C|399
6HCQ|1|A2|C|400
6HCQ|1|A2|A|401
6HCQ|1|A2|C|402
6HCQ|1|A2|G|403
6HCQ|1|A2|G|404

Current chains

Chain A2

18S ribosomal RNA

Nearby chains

Chain J2

eS8

Chain M2

Ribosomal protein S11

Chain Y2

uS12