IL_6HCQ_176

3D structure

PDB id

6HCQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the rabbit collided di-ribosome (collided monosome)

Experimental method

ELECTRON MICROSCOPY

Resolution

6.5 Å

Loop

Sequence

GGGAGUAUG*UGAAACU

Length

16 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6HCQ|1|A2|G|1167
6HCQ|1|A2|G|1168
6HCQ|1|A2|G|1169
6HCQ|1|A2|A|1170
6HCQ|1|A2|G|1171
6HCQ|1|A2|U|1172
6HCQ|1|A2|A|1173
6HCQ|1|A2|U|1174
6HCQ|1|A2|G|1175
*
6HCQ|1|A2|U|1186
6HCQ|1|A2|G|1187
6HCQ|1|A2|A|1188
6HCQ|1|A2|A|1189
6HCQ|1|A2|A|1190
6HCQ|1|A2|C|1191
6HCQ|1|A2|U|1192

Current chains

Chain A2

18S ribosomal RNA

Nearby chains

Chain Y2

uS12

Chain n3

eL41