IL_6HCQ_177

3D structure

PDB id

6HCQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the rabbit collided di-ribosome (collided monosome)

Experimental method

ELECTRON MICROSCOPY

Resolution

6.5 Å

Loop

Sequence

GACG*UGUAC

Length

9 nucleotides

Bulged bases

6HCQ|1|A2|A|1695

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6HCQ|1|A2|G|1203
6HCQ|1|A2|A|1204
6HCQ|1|A2|C|1205
6HCQ|1|A2|G|1206
*
6HCQ|1|A2|U|1692
6HCQ|1|A2|G|1693
6HCQ|1|A2|U|1694
6HCQ|1|A2|A|1695
6HCQ|1|A2|C|1696

Current chains

Chain A2

18S ribosomal RNA

Nearby chains

Chain D2

eS1

Chain b2

eS26