IL_6HCQ_190

3D structure

PDB id

6HCQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the rabbit collided di-ribosome (collided monosome)

Experimental method

ELECTRON MICROSCOPY

Resolution

6.5 Å

Loop

Sequence

CUAACUA*UUCUUAG

Length

14 nucleotides

Bulged bases

6HCQ|1|A2|C|1403, 6HCQ|1|A2|U|1404

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6HCQ|1|A2|C|1399
6HCQ|1|A2|U|1400
6HCQ|1|A2|A|1401
6HCQ|1|A2|A|1402
6HCQ|1|A2|C|1403
6HCQ|1|A2|U|1404
6HCQ|1|A2|A|1405
*
6HCQ|1|A2|U|1441
6HCQ|1|A2|U|1442
6HCQ|1|A2|C|1443
6HCQ|1|A2|U|1444
6HCQ|1|A2|U|1445
6HCQ|1|A2|A|1446
6HCQ|1|A2|G|1447

Current chains

Chain A2

18S ribosomal RNA

Nearby chains

Chain R2

Ribosomal protein S16

Chain V2

uS10

Chain h2

RACK1