IL_6HCQ_200

3D structure

PDB id

6HCQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the rabbit collided di-ribosome (collided monosome)

Experimental method

ELECTRON MICROSCOPY

Resolution

6.5 Å

Loop

Sequence

UUUAGU*ACUUGA

Length

12 nucleotides

Bulged bases

6HCQ|1|A2|U|1804

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6HCQ|1|A2|U|1728
6HCQ|1|A2|U|1729
6HCQ|1|A2|U|1730
6HCQ|1|A2|A|1731
6HCQ|1|A2|G|1732
6HCQ|1|A2|U|1733
*
6HCQ|1|A2|A|1801
6HCQ|1|A2|C|1802
6HCQ|1|A2|U|1803
6HCQ|1|A2|U|1804
6HCQ|1|A2|G|1805
6HCQ|1|A2|A|1806

Current chains

Chain A2

18S ribosomal RNA

Nearby chains

Chain 51

Large subunit ribosomal RNA; LSU rRNA

Chain J2

eS8

Chain V3

Ribosomal protein L23