IL_6HCQ_217

3D structure

PDB id

6HCQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the rabbit collided di-ribosome (collided monosome)

Experimental method

ELECTRON MICROSCOPY

Resolution

6.5 Å

Loop

Sequence

GAGGAUUCAAC*GCGCAUUUCCAC

Length

23 nucleotides

Bulged bases

6HCQ|1|51|C|685, 6HCQ|1|51|U|687

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6HCQ|1|51|G|462
6HCQ|1|51|A|463
6HCQ|1|51|G|464
6HCQ|1|51|G|465
6HCQ|1|51|A|466
6HCQ|1|51|U|467
6HCQ|1|51|U|468
6HCQ|1|51|C|469
6HCQ|1|51|A|470
6HCQ|1|51|A|471
6HCQ|1|51|C|472
*
6HCQ|1|51|G|682
6HCQ|1|51|C|683
6HCQ|1|51|G|684
6HCQ|1|51|C|685
6HCQ|1|51|A|686
6HCQ|1|51|U|687
6HCQ|1|51|U|688
6HCQ|1|51|U|689
6HCQ|1|51|C|690
6HCQ|1|51|C|691
6HCQ|1|51|A|692
6HCQ|1|51|C|693

Current chains

Chain 51

28S ribosomal RNA

Nearby chains

Chain E3

60S ribosomal protein L6

Chain r3

eL28