IL_6HCQ_222

3D structure

PDB id

6HCQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the rabbit collided di-ribosome (collided monosome)

Experimental method

ELECTRON MICROSCOPY

Resolution

6.5 Å

Loop

Sequence

GGCUGGG*CGCC

Length

11 nucleotides

Bulged bases

6HCQ|1|51|G|729, 6HCQ|1|51|G|730

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6HCQ|1|51|G|725
6HCQ|1|51|G|726
6HCQ|1|51|C|727
6HCQ|1|51|U|728
6HCQ|1|51|G|729
6HCQ|1|51|G|730
6HCQ|1|51|G|731
*
6HCQ|1|51|C|938
6HCQ|1|51|G|939
6HCQ|1|51|C|940
6HCQ|1|51|C|941

Current chains

Chain 51

28S ribosomal RNA

Nearby chains

Chain C3

uL4

Chain F3

uL30

Chain M3

Ribosomal protein L14

Chain S3

eL20