IL_6HCQ_226

3D structure

PDB id

6HCQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the rabbit collided di-ribosome (collided monosome)

Experimental method

ELECTRON MICROSCOPY

Resolution

6.5 Å

Loop

Sequence

CCACGGCGCGA*UCGCGCCGUCGG

Length

23 nucleotides

Bulged bases

6HCQ|1|51|C|1210

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6HCQ|1|51|C|1085
6HCQ|1|51|C|1086
6HCQ|1|51|A|1087
6HCQ|1|51|C|1088
6HCQ|1|51|G|1089
6HCQ|1|51|G|1090
6HCQ|1|51|C|1091
6HCQ|1|51|G|1092
6HCQ|1|51|C|1093
6HCQ|1|51|G|1094
6HCQ|1|51|A|1095
*
6HCQ|1|51|U|1201
6HCQ|1|51|C|1202
6HCQ|1|51|G|1203
6HCQ|1|51|C|1204
6HCQ|1|51|G|1205
6HCQ|1|51|C|1206
6HCQ|1|51|C|1207
6HCQ|1|51|G|1208
6HCQ|1|51|U|1209
6HCQ|1|51|C|1210
6HCQ|1|51|G|1211
6HCQ|1|51|G|1212

Current chains

Chain 51

28S ribosomal RNA

Nearby chains

Chain F3

uL30

Chain T3

eL21