IL_6HCQ_235
3D structure
- PDB id
- 6HCQ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the rabbit collided di-ribosome (collided monosome)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 6.5 Å
Loop
- Sequence
- UGAUAUAGACAGCAGGAUGGUGGCCAUGGAAGUCGGAAUCCGCUAAGGAGUG*CUCACCUGCCGAAUCA
- Length
- 68 nucleotides
- Bulged bases
- 6HCQ|1|51|A|1956, 6HCQ|1|51|A|1958, 6HCQ|1|51|A|1960, 6HCQ|1|51|C|1966, 6HCQ|1|51|A|1967, 6HCQ|1|51|G|1968, 6HCQ|1|51|U|1971, 6HCQ|1|51|G|1972, 6HCQ|1|51|C|1996, 6HCQ|1|51|U|1997, 6HCQ|1|51|G|2000, 6HCQ|1|51|C|2018, 6HCQ|1|51|C|2022, 6HCQ|1|51|A|2026
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6HCQ|1|51|U|1954
6HCQ|1|51|G|1955
6HCQ|1|51|A|1956
6HCQ|1|51|U|1957
6HCQ|1|51|A|1958
6HCQ|1|51|U|1959
6HCQ|1|51|A|1960
6HCQ|1|51|G|1961
6HCQ|1|51|A|1962
6HCQ|1|51|C|1963
6HCQ|1|51|A|1964
6HCQ|1|51|G|1965
6HCQ|1|51|C|1966
6HCQ|1|51|A|1967
6HCQ|1|51|G|1968
6HCQ|1|51|G|1969
6HCQ|1|51|A|1970
6HCQ|1|51|U|1971
6HCQ|1|51|G|1972
6HCQ|1|51|G|1973
6HCQ|1|51|U|1974
6HCQ|1|51|G|1975
6HCQ|1|51|G|1976
6HCQ|1|51|C|1977
6HCQ|1|51|C|1978
6HCQ|1|51|A|1979
6HCQ|1|51|U|1980
6HCQ|1|51|G|1981
6HCQ|1|51|G|1982
6HCQ|1|51|A|1983
6HCQ|1|51|A|1984
6HCQ|1|51|G|1985
6HCQ|1|51|U|1986
6HCQ|1|51|C|1987
6HCQ|1|51|G|1988
6HCQ|1|51|G|1989
6HCQ|1|51|A|1990
6HCQ|1|51|A|1991
6HCQ|1|51|U|1992
6HCQ|1|51|C|1993
6HCQ|1|51|C|1994
6HCQ|1|51|G|1995
6HCQ|1|51|C|1996
6HCQ|1|51|U|1997
6HCQ|1|51|A|1998
6HCQ|1|51|A|1999
6HCQ|1|51|G|2000
6HCQ|1|51|G|2001
6HCQ|1|51|A|2002
6HCQ|1|51|G|2003
6HCQ|1|51|U|2004
6HCQ|1|51|G|2005
*
6HCQ|1|51|C|2014
6HCQ|1|51|U|2015
6HCQ|1|51|C|2016
6HCQ|1|51|A|2017
6HCQ|1|51|C|2018
6HCQ|1|51|C|2019
6HCQ|1|51|U|2020
6HCQ|1|51|G|2021
6HCQ|1|51|C|2022
6HCQ|1|51|C|2023
6HCQ|1|51|G|2024
6HCQ|1|51|A|2025
6HCQ|1|51|A|2026
6HCQ|1|51|U|2027
6HCQ|1|51|C|2028
6HCQ|1|51|A|2029
Current chains
- Chain 51
- 28S ribosomal RNA
Nearby chains
- Chain H3
- uL6
- Chain I3
- 60S ribosomal protein L10
- Chain S3
- eL20
- Chain m3
- eL40
- Chain t3
- uL10
- Chain u3
- Ribosomal protein L12
Coloring options: