IL_6HCQ_238

3D structure

PDB id

6HCQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the rabbit collided di-ribosome (collided monosome)

Experimental method

ELECTRON MICROSCOPY

Resolution

6.5 Å

Loop

Sequence

UGUGAACA*UGAACA

Length

14 nucleotides

Bulged bases

6HCQ|1|51|A|2428

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6HCQ|1|51|U|2413
6HCQ|1|51|G|2414
6HCQ|1|51|U|2415
6HCQ|1|51|G|2416
6HCQ|1|51|A|2417
6HCQ|1|51|A|2418
6HCQ|1|51|C|2419
6HCQ|1|51|A|2420
*
6HCQ|1|51|U|2426
6HCQ|1|51|G|2427
6HCQ|1|51|A|2428
6HCQ|1|51|A|2429
6HCQ|1|51|C|2430
6HCQ|1|51|A|2431

Current chains

Chain 51

28S ribosomal RNA

Nearby chains

Chain 1

nascent chain

Chain P3

uL22

Chain R3

eL19

Chain l3

eL39