IL_6HCQ_239

3D structure

PDB id

6HCQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the rabbit collided di-ribosome (collided monosome)

Experimental method

ELECTRON MICROSCOPY

Resolution

6.5 Å

Loop

Sequence

CGGAGUGG*CGCCG

Length

13 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6HCQ|1|51|C|2540
6HCQ|1|51|G|2541
6HCQ|1|51|G|2542
6HCQ|1|51|A|2543
6HCQ|1|51|G|2544
6HCQ|1|51|U|2545
6HCQ|1|51|G|2546
6HCQ|1|51|G|2547
*
6HCQ|1|51|C|2772
6HCQ|1|51|G|2773
6HCQ|1|51|C|2774
6HCQ|1|51|C|2775
6HCQ|1|51|G|2776

Current chains

Chain 51

28S ribosomal RNA

Nearby chains

Chain 81

5.8S ribosomal RNA; 5.8S rRNA

Chain X3

uL23

Chain g3

eL34

Chain k3

eL38