IL_6HCQ_244

3D structure

PDB id

6HCQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the rabbit collided di-ribosome (collided monosome)

Experimental method

ELECTRON MICROSCOPY

Resolution

6.5 Å

Loop

Sequence

GGAACAAUGUAGGUAAG*CCUACCUACUAUCC

Length

31 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6HCQ|1|51|G|2830
6HCQ|1|51|G|2831
6HCQ|1|51|A|2832
6HCQ|1|51|A|2833
6HCQ|1|51|C|2834
6HCQ|1|51|A|2835
6HCQ|1|51|A|2836
6HCQ|1|51|U|2837
6HCQ|1|51|G|2838
6HCQ|1|51|U|2839
6HCQ|1|51|A|2840
6HCQ|1|51|G|2841
6HCQ|1|51|G|2842
6HCQ|1|51|U|2843
6HCQ|1|51|A|2844
6HCQ|1|51|A|2845
6HCQ|1|51|G|2846
*
6HCQ|1|51|C|3842
6HCQ|1|51|C|3843
6HCQ|1|51|U|3844
6HCQ|1|51|A|3845
6HCQ|1|51|C|3846
6HCQ|1|51|C|3847
6HCQ|1|51|U|3848
6HCQ|1|51|A|3849
6HCQ|1|51|C|3850
6HCQ|1|51|U|3851
6HCQ|1|51|A|3852
6HCQ|1|51|U|3853
6HCQ|1|51|C|3854
6HCQ|1|51|C|3855

Current chains

Chain 51

28S ribosomal RNA

Nearby chains

Chain B3

uL3

Chain P3

uL22

Chain V3

Ribosomal protein L23

Chain d3

eL31