IL_6HCQ_251

3D structure

PDB id

6HCQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the rabbit collided di-ribosome (collided monosome)

Experimental method

ELECTRON MICROSCOPY

Resolution

6.5 Å

Loop

Sequence

AGAGACAUGA*UGAUCGUUUUUU

Length

22 nucleotides

Bulged bases

6HCQ|1|51|C|3948

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6HCQ|1|51|A|3943
6HCQ|1|51|G|3944
6HCQ|1|51|A|3945
6HCQ|1|51|G|3946
6HCQ|1|51|A|3947
6HCQ|1|51|C|3948
6HCQ|1|51|A|3949
6HCQ|1|51|U|3950
6HCQ|1|51|G|3951
6HCQ|1|51|A|3952
*
6HCQ|1|51|U|4060
6HCQ|1|51|G|4061
6HCQ|1|51|A|4062
6HCQ|1|51|U|4063
6HCQ|1|51|C|4064
6HCQ|1|51|G|4065
6HCQ|1|51|U|4066
6HCQ|1|51|U|4067
6HCQ|1|51|U|4068
6HCQ|1|51|U|4069
6HCQ|1|51|U|4070
6HCQ|1|51|U|4071

Current chains

Chain 51

28S ribosomal RNA

Nearby chains

Chain C2

40S ribosomal protein S3a

Chain i3

60S ribosomal protein L36

Chain w3

Ribosomal protein