IL_6HCQ_259

3D structure

PDB id

6HCQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the rabbit collided di-ribosome (collided monosome)

Experimental method

ELECTRON MICROSCOPY

Resolution

6.5 Å

Loop

Sequence

CUGCUCAGUAC*GGAACCGCAG

Length

21 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6HCQ|1|51|C|4593
6HCQ|1|51|U|4594
6HCQ|1|51|G|4595
6HCQ|1|51|C|4596
6HCQ|1|51|U|4597
6HCQ|1|51|C|4598
6HCQ|1|51|A|4599
6HCQ|1|51|G|4600
6HCQ|1|51|U|4601
6HCQ|1|51|A|4602
6HCQ|1|51|C|4603
*
6HCQ|1|51|G|4608
6HCQ|1|51|G|4609
6HCQ|1|51|A|4610
6HCQ|1|51|A|4611
6HCQ|1|51|C|4612
6HCQ|1|51|C|4613
6HCQ|1|51|G|4614
6HCQ|1|51|C|4615
6HCQ|1|51|A|4616
6HCQ|1|51|G|4617

Current chains

Chain 51

28S ribosomal RNA

Nearby chains

Chain B3

uL3

Chain H3

uL6

Chain V3

Ribosomal protein L23

Chain m3

eL40