IL_6HCQ_275

3D structure

PDB id

6HCQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the rabbit collided di-ribosome (collided monosome)

Experimental method

ELECTRON MICROSCOPY

Resolution

6.5 Å

Loop

Sequence

GAUAAC*GCUAAUAC

Length

14 nucleotides

Bulged bases

6HCQ|1|A2|U|172

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6HCQ|1|A2|G|146
6HCQ|1|A2|A|147
6HCQ|1|A2|U|148
6HCQ|1|A2|A|149
6HCQ|1|A2|A|150
6HCQ|1|A2|C|151
*
6HCQ|1|A2|G|167
6HCQ|1|A2|C|168
6HCQ|1|A2|U|169
6HCQ|1|A2|A|170
6HCQ|1|A2|A|171
6HCQ|1|A2|U|172
6HCQ|1|A2|A|173
6HCQ|1|A2|C|174

Current chains

Chain A2

18S ribosomal RNA

Nearby chains

Chain H2

40S ribosomal protein S6

Chain Z2

eS24