IL_6HCQ_279

3D structure

PDB id

6HCQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the rabbit collided di-ribosome (collided monosome)

Experimental method

ELECTRON MICROSCOPY

Resolution

6.5 Å

Loop

Sequence

AAUACAGGACU*AGGCCCUGUAAUU

Length

24 nucleotides

Bulged bases

6HCQ|1|A2|C|549, 6HCQ|1|A2|A|555

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6HCQ|1|A2|A|528
6HCQ|1|A2|A|529
6HCQ|1|A2|U|530
6HCQ|1|A2|A|531
6HCQ|1|A2|C|532
6HCQ|1|A2|A|533
6HCQ|1|A2|G|534
6HCQ|1|A2|G|535
6HCQ|1|A2|A|536
6HCQ|1|A2|C|537
6HCQ|1|A2|U|538
*
6HCQ|1|A2|A|545
6HCQ|1|A2|G|546
6HCQ|1|A2|G|547
6HCQ|1|A2|C|548
6HCQ|1|A2|C|549
6HCQ|1|A2|C|550
6HCQ|1|A2|U|551
6HCQ|1|A2|G|552
6HCQ|1|A2|U|553
6HCQ|1|A2|A|554
6HCQ|1|A2|A|555
6HCQ|1|A2|U|556
6HCQ|1|A2|U|557

Current chains

Chain A2

18S ribosomal RNA

Nearby chains

Chain K2

Ribosomal protein S9 (Predicted)

Chain f2

40S ribosomal protein S30