IL_6HCQ_299
3D structure
- PDB id
- 6HCQ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the rabbit collided di-ribosome (collided monosome)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 6.5 Å
Loop
- Sequence
- CGAGACCGAUAGUCAACAAGUACCGUAAGGGAAAG*CUCGGCUCG
- Length
- 44 nucleotides
- Bulged bases
- 6HCQ|1|51|A|349, 6HCQ|1|51|U|354, 6HCQ|1|51|A|362, 6HCQ|1|81|C|23
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6HCQ|1|51|C|345
6HCQ|1|51|G|346
6HCQ|1|51|A|347
6HCQ|1|51|G|348
6HCQ|1|51|A|349
6HCQ|1|51|C|350
6HCQ|1|51|C|351
6HCQ|1|51|G|352
6HCQ|1|51|A|353
6HCQ|1|51|U|354
6HCQ|1|51|A|355
6HCQ|1|51|G|356
6HCQ|1|51|U|357
6HCQ|1|51|C|358
6HCQ|1|51|A|359
6HCQ|1|51|A|360
6HCQ|1|51|C|361
6HCQ|1|51|A|362
6HCQ|1|51|A|363
6HCQ|1|51|G|364
6HCQ|1|51|U|365
6HCQ|1|51|A|366
6HCQ|1|51|C|367
6HCQ|1|51|C|368
6HCQ|1|51|G|369
6HCQ|1|51|U|370
6HCQ|1|51|A|371
6HCQ|1|51|A|372
6HCQ|1|51|G|373
6HCQ|1|51|G|374
6HCQ|1|51|G|375
6HCQ|1|51|A|376
6HCQ|1|51|A|377
6HCQ|1|51|A|378
6HCQ|1|51|G|379
*
6HCQ|1|81|C|21
6HCQ|1|81|U|22
6HCQ|1|81|C|23
6HCQ|1|81|G|24
6HCQ|1|81|G|25
6HCQ|1|81|C|26
6HCQ|1|81|U|27
6HCQ|1|81|C|28
6HCQ|1|81|G|29
Current chains
- Chain 51
- 28S ribosomal RNA
- Chain 81
- 5.8S ribosomal RNA
Nearby chains
- Chain 1
- nascent chain
- Chain C3
- uL4
- Chain L3
- eL13
- Chain Y3
- Ribosomal protein L26
- Chain j3
- Ribosomal protein L37
- Chain l3
- eL39
Coloring options: