IL_6HCQ_322
3D structure
- PDB id
- 6HCQ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the rabbit collided di-ribosome (collided monosome)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 6.5 Å
Loop
- Sequence
- AGCGG*UACU
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6HCQ_322 not in the Motif Atlas
- Geometric match to IL_8OI5_103
- Geometric discrepancy: 0.3796
- The information below is about IL_8OI5_103
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_60246.1
- Basepair signature
- cWW-cWW-L-R-L-cWW
- Number of instances in this motif group
- 5
Unit IDs
6HCQ|1|51|A|3894
6HCQ|1|51|G|3895
6HCQ|1|51|C|3896
6HCQ|1|51|G|3897
6HCQ|1|51|G|3898
*
6HCQ|1|51|U|4563
6HCQ|1|51|A|4564
6HCQ|1|51|C|4565
6HCQ|1|51|U|4566
Current chains
- Chain 51
- 28S ribosomal RNA
Nearby chains
- Chain B3
- uL3
- Chain O3
- uL13
- Chain P3
- uL22
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