IL_6HCQ_330

3D structure

PDB id

6HCQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the rabbit collided di-ribosome (collided monosome)

Experimental method

ELECTRON MICROSCOPY

Resolution

6.5 Å

Loop

Sequence

UGUAUGUGC*GGGCGAAG

Length

17 nucleotides

Bulged bases

6HCQ|1|51|U|4634, 6HCQ|1|51|U|4636

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6HCQ|1|51|U|4632
6HCQ|1|51|G|4633
6HCQ|1|51|U|4634
6HCQ|1|51|A|4635
6HCQ|1|51|U|4636
6HCQ|1|51|G|4637
6HCQ|1|51|U|4638
6HCQ|1|51|G|4639
6HCQ|1|51|C|4640
*
6HCQ|1|51|G|4659
6HCQ|1|51|G|4660
6HCQ|1|51|G|4661
6HCQ|1|51|C|4662
6HCQ|1|51|G|4663
6HCQ|1|51|A|4664
6HCQ|1|51|A|4665
6HCQ|1|51|G|4666

Current chains

Chain 51

28S ribosomal RNA

Nearby chains

Chain B3

uL3

Chain d3

eL31