IL_6HCQ_347
3D structure
- PDB id
- 6HCQ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the rabbit collided di-ribosome (collided monosome)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 6.5 Å
Loop
- Sequence
- CGACUG*UUCCGGGAAACCAAAGUCUUUGG
- Length
- 29 nucleotides
- Bulged bases
- 6HCQ|1|A2|C|1138, 6HCQ|1|A2|A|1150, 6HCQ|1|A2|C|1153, 6HCQ|1|A2|U|1155, 6HCQ|1|A2|G|1157
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6HCQ|1|A2|C|1091
6HCQ|1|A2|G|1092
6HCQ|1|A2|A|1093
6HCQ|1|A2|C|1094
6HCQ|1|A2|U|1095
6HCQ|1|A2|G|1096
*
6HCQ|1|A2|U|1136
6HCQ|1|A2|U|1137
6HCQ|1|A2|C|1138
6HCQ|1|A2|C|1139
6HCQ|1|A2|G|1140
6HCQ|1|A2|G|1141
6HCQ|1|A2|G|1142
6HCQ|1|A2|A|1143
6HCQ|1|A2|A|1144
6HCQ|1|A2|A|1145
6HCQ|1|A2|C|1146
6HCQ|1|A2|C|1147
6HCQ|1|A2|A|1148
6HCQ|1|A2|A|1149
6HCQ|1|A2|A|1150
6HCQ|1|A2|G|1151
6HCQ|1|A2|U|1152
6HCQ|1|A2|C|1153
6HCQ|1|A2|U|1154
6HCQ|1|A2|U|1155
6HCQ|1|A2|U|1156
6HCQ|1|A2|G|1157
6HCQ|1|A2|G|1158
Current chains
- Chain A2
- 18S ribosomal RNA
Nearby chains
- Chain B2
- uS2
- Chain D2
- eS1
- Chain M2
- Ribosomal protein S11
- Chain O2
- uS15
- Chain W2
- eS21
- Chain X2
- Ribosomal protein S15a
- Chain Y2
- uS12
- Chain b2
- eS26
- Chain c2
- 40S ribosomal protein S27
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