IL_6HCQ_350

3D structure

PDB id

6HCQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the rabbit collided di-ribosome (collided monosome)

Experimental method

ELECTRON MICROSCOPY

Resolution

6.5 Å

Loop

Sequence

GUCGCU*AAAAGUC

Length

13 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6HCQ|1|A2|G|1706
6HCQ|1|A2|U|1707
6HCQ|1|A2|C|1708
6HCQ|1|A2|G|1709
6HCQ|1|A2|C|1710
6HCQ|1|A2|U|1711
*
6HCQ|1|A2|A|1822
6HCQ|1|A2|A|1823
6HCQ|1|A2|A|1824
6HCQ|1|A2|A|1825
6HCQ|1|A2|G|1826
6HCQ|1|A2|U|1827
6HCQ|1|A2|C|1828

Current chains

Chain A2

18S ribosomal RNA

Nearby chains

Chain 51

Large subunit ribosomal RNA; LSU rRNA

Chain Y2

uS12

Chain n3

eL41

Chain q3

Transfer RNA; tRNA

Chain v3

mRNA