IL_6HD7_009
3D structure
- PDB id
- 6HD7 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the ribosome-NatA complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.4 Å
Loop
- Sequence
- UG*UUUGUA
- Length
- 8 nucleotides
- Bulged bases
- 6HD7|1|1|U|252
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6HD7_009 not in the Motif Atlas
- Homologous match to IL_5TBW_010
- Geometric discrepancy: 0.4167
- The information below is about IL_5TBW_010
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_37379.1
- Basepair signature
- cWW-L-cWW-L-L
- Number of instances in this motif group
- 1
Unit IDs
6HD7|1|1|U|169
6HD7|1|1|G|170
*
6HD7|1|1|U|248
6HD7|1|1|U|249
6HD7|1|1|U|250
6HD7|1|1|G|251
6HD7|1|1|U|252
6HD7|1|1|A|253
Current chains
- Chain 1
- Saccharomyces cerevisiae S288C 35S pre-ribosomal RNA (RDN37-1), miscRNA
Nearby chains
- Chain K
- 60S ribosomal protein L8-A
- Chain N
- 60S ribosomal protein L13-A
- Chain j
- 60S ribosomal protein L35-A
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