IL_6HD7_064

3D structure

PDB id

6HD7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the ribosome-NatA complex

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

GGAUU*AGUUUUC

Length

12 nucleotides

Bulged bases

6HD7|1|1|U|1821

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6HD7|1|1|G|1623
6HD7|1|1|G|1624
6HD7|1|1|A|1625
6HD7|1|1|U|1626
6HD7|1|1|U|1627
*
6HD7|1|1|A|1816
6HD7|1|1|G|1817
6HD7|1|1|U|1818
6HD7|1|1|U|1819
6HD7|1|1|U|1820
6HD7|1|1|U|1821
6HD7|1|1|C|1822

Current chains

Chain 1

Saccharomyces cerevisiae S288C 35S pre-ribosomal RNA (RDN37-1), miscRNA

Nearby chains

Chain b

60S ribosomal protein L27-A

Chain i

60S ribosomal protein L34-A

Chain m

60S ribosomal protein L38