IL_6HD7_080

3D structure

PDB id

6HD7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the ribosome-NatA complex

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

GGG*CAAUUAAC

Length

11 nucleotides

Bulged bases

6HD7|1|1|G|1953, 6HD7|1|1|A|2088, 6HD7|1|1|A|2093

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6HD7|1|1|G|1952
6HD7|1|1|G|1953
6HD7|1|1|G|1954
*
6HD7|1|1|C|2087
6HD7|1|1|A|2088
6HD7|1|1|A|2089
6HD7|1|1|U|2090
6HD7|1|1|U|2091
6HD7|1|1|A|2092
6HD7|1|1|A|2093
6HD7|1|1|C|2094

Current chains

Chain 1

Saccharomyces cerevisiae S288C 35S pre-ribosomal RNA (RDN37-1), miscRNA

Nearby chains

Chain T

60S ribosomal protein L19-A