IL_6HD7_083

3D structure

PDB id

6HD7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the ribosome-NatA complex

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

CUUG*CUUG

Length

8 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6HD7_083 not in the Motif Atlas

Geometric match to IL_5UNE_005

Geometric discrepancy: 0.3087

The information below is about IL_5UNE_005

Detailed Annotation

tSH-tHW

Broad Annotation

No text annotation

Motif group

IL_85033.2

Basepair signature

cWW-cWW-cWW-cWW

Number of instances in this motif group

35

Unit IDs

6HD7|1|1|C|1988
6HD7|1|1|U|1989
6HD7|1|1|U|1990
6HD7|1|1|G|1991
*
6HD7|1|1|C|2030
6HD7|1|1|U|2031
6HD7|1|1|U|2032
6HD7|1|1|G|2033

Current chains

Chain 1

Saccharomyces cerevisiae S288C 35S pre-ribosomal RNA (RDN37-1), miscRNA

Nearby chains