IL_6HD7_089

3D structure

PDB id

6HD7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the ribosome-NatA complex

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

CUGAAUG*CGCG

Length

11 nucleotides

Bulged bases

6HD7|1|1|U|2205, 6HD7|1|1|U|2209

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6HD7|1|1|C|2204
6HD7|1|1|U|2205
6HD7|1|1|G|2206
6HD7|1|1|A|2207
6HD7|1|1|A|2208
6HD7|1|1|U|2209
6HD7|1|1|G|2210
*
6HD7|1|1|C|2235
6HD7|1|1|G|2236
6HD7|1|1|C|2237
6HD7|1|1|G|2238

Current chains

Chain 1

Saccharomyces cerevisiae S288C 35S pre-ribosomal RNA (RDN37-1), miscRNA

Nearby chains

Chain E

60S ribosomal protein L2-A

Chain r

ribosomal protein RPL1