IL_6HMA_049

3D structure

PDB id

6HMA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Improved model derived from cryo-EM map of Staphylococcus aureus large ribosomal subunit

Experimental method

ELECTRON MICROSCOPY

Resolution

2.65 Å

Loop

Sequence

UAAUCGUUUUAAU*AUAGAAAA

Length

21 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6HMA|1|A|U|1448
6HMA|1|A|A|1449
6HMA|1|A|A|1450
6HMA|1|A|U|1451
6HMA|1|A|C|1452
6HMA|1|A|G|1453
6HMA|1|A|U|1454
6HMA|1|A|U|1455
6HMA|1|A|U|1456
6HMA|1|A|U|1457
6HMA|1|A|A|1458
6HMA|1|A|A|1459
6HMA|1|A|U|1460
*
6HMA|1|A|A|1628
6HMA|1|A|U|1629
6HMA|1|A|A|1630
6HMA|1|A|G|1631
6HMA|1|A|A|1632
6HMA|1|A|A|1633
6HMA|1|A|A|1634
6HMA|1|A|A|1635

Current chains

Chain A

23S ribosomal RNA

Nearby chains