IL_6HMA_080

3D structure

PDB id

6HMA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Improved model derived from cryo-EM map of Staphylococcus aureus large ribosomal subunit

Experimental method

ELECTRON MICROSCOPY

Resolution

2.65 Å

Loop

Sequence

GGAG*CGCUGGUGGGAUAC

Length

18 nucleotides

Bulged bases

6HMA|1|A|A|2153, 6HMA|1|A|U|2194

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6HMA|1|A|G|2151
6HMA|1|A|G|2152
6HMA|1|A|A|2153
6HMA|1|A|G|2154
*
6HMA|1|A|C|2188
6HMA|1|A|G|2189
6HMA|1|A|C|2190
6HMA|1|A|U|2191
6HMA|1|A|G|2192
6HMA|1|A|G|2193
6HMA|1|A|U|2194
6HMA|1|A|G|2195
6HMA|1|A|G|2196
6HMA|1|A|G|2197
6HMA|1|A|A|2198
6HMA|1|A|U|2199
6HMA|1|A|A|2200
6HMA|1|A|C|2201

Current chains

Chain A

23S ribosomal RNA

Nearby chains