IL_6HMA_081

3D structure

PDB id

6HMA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Improved model derived from cryo-EM map of Staphylococcus aureus large ribosomal subunit

Experimental method

ELECTRON MICROSCOPY

Resolution

2.65 Å

Loop

Sequence

CUUUGAAAC*GUGGAG

Length

15 nucleotides

Bulged bases

6HMA|1|A|U|2158, 6HMA|1|A|A|2163

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6HMA|1|A|C|2156
6HMA|1|A|U|2157
6HMA|1|A|U|2158
6HMA|1|A|U|2159
6HMA|1|A|G|2160
6HMA|1|A|A|2161
6HMA|1|A|A|2162
6HMA|1|A|A|2163
6HMA|1|A|C|2164
*
6HMA|1|A|G|2181
6HMA|1|A|U|2182
6HMA|1|A|G|2183
6HMA|1|A|G|2184
6HMA|1|A|A|2185
6HMA|1|A|G|2186

Current chains

Chain A

23S ribosomal RNA

Nearby chains