IL_6HRM_070
3D structure
- PDB id
- 6HRM (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli 70S d2d8 stapled ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.96 Å
Loop
- Sequence
- GUAAG*CGUUAUAAC
- Length
- 14 nucleotides
- Bulged bases
- 6HRM|1|1|U|1608
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6HRM_070 not in the Motif Atlas
- Geometric match to IL_5J7L_248
- Geometric discrepancy: 0.0989
- The information below is about IL_5J7L_248
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_37015.1
- Basepair signature
- cWW-tSS-tSS-tHH-L-tHS-L-R-cWW-L
- Number of instances in this motif group
- 1
Unit IDs
6HRM|1|1|G|1587
6HRM|1|1|U|1588
6HRM|1|1|A|1589
6HRM|1|1|A|1590
6HRM|1|1|G|1591
*
6HRM|1|1|C|1603
6HRM|1|1|G|1604
6HRM|1|1|U|1605
6HRM|1|1|U|1606
6HRM|1|1|A|1607
6HRM|1|1|U|1608
6HRM|1|1|A|1609
6HRM|1|1|A|1610
6HRM|1|1|C|1611
Current chains
- Chain 1
- stapled 16S-23S rRNA,stapled 16S-23S rRNA,stapled 16S-23S rRNA,stapled 16S-23S rRNA
Nearby chains
- Chain U
- 50S ribosomal protein L24
- Chain Y
- 50S ribosomal protein L29
Coloring options: