IL_6HRM_104

3D structure

PDB id

6HRM (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S d2d8 stapled ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.96 Å

Loop

Sequence

UGGGAAG*CGGCCUG

Length

14 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6HRM|1|1|U|2541
6HRM|1|1|G|2542
6HRM|1|1|G|2543
6HRM|1|1|G|2544
6HRM|1|1|A|2545
6HRM|1|1|A|2546
6HRM|1|1|G|2547
*
6HRM|1|1|C|2620
6HRM|1|1|G|2621
6HRM|1|1|G|2622
6HRM|1|1|C|2623
6HRM|1|1|C|2624
6HRM|1|1|U|2625
6HRM|1|1|G|2626

Current chains

Chain 1

stapled 16S-23S rRNA,stapled 16S-23S rRNA,stapled 16S-23S rRNA,stapled 16S-23S rRNA

Nearby chains

Chain 3

5S ribosomal RNA; 5S rRNA

Chain F

50S ribosomal protein L6

Chain M

50S ribosomal protein L16

Chain V

50S ribosomal protein L25

Chain f

50S ribosomal protein L36