IL_6HRM_148

3D structure

PDB id

6HRM (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S d2d8 stapled ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.96 Å

Loop

Sequence

GGGAG*CGACCUUGAAAUACC

Length

20 nucleotides

Bulged bases

6HRM|1|1|C|3670, 6HRM|1|1|U|3678

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6HRM|1|1|G|3629
6HRM|1|1|G|3630
6HRM|1|1|G|3631
6HRM|1|1|A|3632
6HRM|1|1|G|3633
*
6HRM|1|1|C|3667
6HRM|1|1|G|3668
6HRM|1|1|A|3669
6HRM|1|1|C|3670
6HRM|1|1|C|3671
6HRM|1|1|U|3672
6HRM|1|1|U|3673
6HRM|1|1|G|3674
6HRM|1|1|A|3675
6HRM|1|1|A|3676
6HRM|1|1|A|3677
6HRM|1|1|U|3678
6HRM|1|1|A|3679
6HRM|1|1|C|3680
6HRM|1|1|C|3681

Current chains

Chain 1

stapled 16S-23S rRNA,stapled 16S-23S rRNA,stapled 16S-23S rRNA,stapled 16S-23S rRNA

Nearby chains