IL_6HRM_179

3D structure

PDB id

6HRM (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S d2d8 stapled ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.96 Å

Loop

Sequence

GAGAAG*CGGACCUC

Length

14 nucleotides

Bulged bases

6HRM|1|1|A|1257, 6HRM|1|1|A|1280, 6HRM|1|1|C|1281

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6HRM|1|1|G|1253
6HRM|1|1|A|1254
6HRM|1|1|G|1255
6HRM|1|1|A|1256
6HRM|1|1|A|1257
6HRM|1|1|G|1258
*
6HRM|1|1|C|1277
6HRM|1|1|G|1278
6HRM|1|1|G|1279
6HRM|1|1|A|1280
6HRM|1|1|C|1281
6HRM|1|1|C|1282
6HRM|1|1|U|1283
6HRM|1|1|C|1284

Current chains

Chain 1

stapled 16S-23S rRNA,stapled 16S-23S rRNA,stapled 16S-23S rRNA,stapled 16S-23S rRNA

Nearby chains

Chain h

30S ribosomal protein S3

Chain o

30S ribosomal protein S10

Chain s

30S ribosomal protein S14