IL_6HRM_187
3D structure
- PDB id
- 6HRM (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli 70S d2d8 stapled ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.96 Å
Loop
- Sequence
- GGAACUAGG*CUGUC
- Length
- 14 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6HRM_187 not in the Motif Atlas
- Geometric match to IL_4WF9_117
- Geometric discrepancy: 0.0603
- The information below is about IL_4WF9_117
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_80252.1
- Basepair signature
- cWW-tSH-cWW-tHW-R-L-cWW-L-L-R
- Number of instances in this motif group
- 10
Unit IDs
6HRM|1|1|G|3172
6HRM|1|1|G|3173
6HRM|1|1|A|3174
6HRM|1|1|A|3175
6HRM|1|1|C|3176
6HRM|1|1|U|3177
6HRM|1|1|A|3178
6HRM|1|1|G|3179
6HRM|1|1|G|3180
*
6HRM|1|1|C|3496
6HRM|1|1|U|3497
6HRM|1|1|G|3498
6HRM|1|1|U|3499
6HRM|1|1|C|3500
Current chains
- Chain 1
- stapled 16S-23S rRNA,stapled 16S-23S rRNA,stapled 16S-23S rRNA,stapled 16S-23S rRNA
Nearby chains
- Chain C
- 50S ribosomal protein L3
- Chain K
- 50S ribosomal protein L14
Coloring options: