IL_6HTQ_031
3D structure
- PDB id
- 6HTQ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Stringent response control by a bifunctional RelA enzyme in the presence and absence of the ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.5 Å
Loop
- Sequence
- GCCAG*CUGC
- Length
- 9 nucleotides
- Bulged bases
- 6HTQ|1|A|C|1041
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6HTQ_031 not in the Motif Atlas
- Geometric match to IL_4V88_429
- Geometric discrepancy: 0.2894
- The information below is about IL_4V88_429
- Detailed Annotation
- Tandem non-canonical cWW pairs
- Broad Annotation
- No text annotation
- Motif group
- IL_30621.4
- Basepair signature
- cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 66
Unit IDs
6HTQ|1|A|G|1039
6HTQ|1|A|C|1040
6HTQ|1|A|C|1041
6HTQ|1|A|A|1042
6HTQ|1|A|G|1043
*
6HTQ|1|A|C|1204
6HTQ|1|A|U|1205
6HTQ|1|A|G|1206
6HTQ|1|A|C|1207
Current chains
- Chain A
- 23S ribosomal RNA
Nearby chains
- Chain J
- 50S ribosomal protein L13
- Chain Q
- 50S ribosomal protein L20
- Chain R
- 50S ribosomal protein L21
- Chain Y
- 50S ribosomal protein L30
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