IL_6HTQ_043
3D structure
- PDB id
- 6HTQ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Stringent response control by a bifunctional RelA enzyme in the presence and absence of the ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.5 Å
Loop
- Sequence
- AUGAGUAG*UGAAAUU
- Length
- 15 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6HTQ_043 not in the Motif Atlas
- Homologous match to IL_7RQB_049
- Geometric discrepancy: 0.1491
- The information below is about IL_7RQB_049
- Detailed Annotation
- 8x7 Sarcin-Ricin; G-bulge
- Broad Annotation
- Sarcin-Ricin; G-bulge
- Motif group
- IL_04346.7
- Basepair signature
- cWW-cWW-tSH-tHH-cSH-tWH-tHS-cWW
- Number of instances in this motif group
- 15
Unit IDs
6HTQ|1|A|A|1302
6HTQ|1|A|U|1303
6HTQ|1|A|G|1304
6HTQ|1|A|A|1305
6HTQ|1|A|G|1306
6HTQ|1|A|U|1307
6HTQ|1|A|A|1308
6HTQ|1|A|G|1309
*
6HTQ|1|A|U|2040
6HTQ|1|A|G|2041
6HTQ|1|A|A|2042
6HTQ|1|A|A|2043
6HTQ|1|A|A|2044
6HTQ|1|A|U|2045
6HTQ|1|A|U|2046
Current chains
- Chain A
- 23S ribosomal RNA
Nearby chains
- Chain 1
- 50S ribosomal protein L32
- Chain E
- 50S ribosomal protein L4
- Chain N
- 50S ribosomal protein L17
- Chain S
- 50S ribosomal protein L22
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