IL_6HTQ_053

3D structure

PDB id

6HTQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Stringent response control by a bifunctional RelA enzyme in the presence and absence of the ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

4.5 Å

Loop

Sequence

UUAG*UGAG

Length

8 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6HTQ_053 not in the Motif Atlas

Geometric match to IL_4LFB_060

Geometric discrepancy: 0.2202

The information below is about IL_4LFB_060

Detailed Annotation

Double sheared

Broad Annotation

Double sheared

Motif group

IL_58355.2

Basepair signature

cWW-tSH-tHS-cWW

Number of instances in this motif group

43

Unit IDs

6HTQ|1|A|U|1522
6HTQ|1|A|U|1523
6HTQ|1|A|A|1524
6HTQ|1|A|G|1525
*
6HTQ|1|A|U|1560
6HTQ|1|A|G|1561
6HTQ|1|A|A|1562
6HTQ|1|A|G|1563

Current chains

Chain A

23S ribosomal RNA

Nearby chains